1. Cross-Species Prediction of Transcription Factor Binding Restricted (Penn State Only) Author: Agarwala, Vandana Title: Cross-Species Prediction of Transcription Factor Binding Area of Honors: Computer Science Keywords: Gene RegulationDeep LearningTransfer LearningDomain AdaptationComputational BiologyBioinformaticsMachine Learning File: Login to Download Thesis Supervisors: Shaun Mahony, Thesis SupervisorJohn Joseph Hannan, Thesis Honors Advisor
2. Neural Networks for Regulatory Element Analysis at Repetitive Genomic Regions Restricted (Penn State Only) Author: Shi, Jeff Title: Neural Networks for Regulatory Element Analysis at Repetitive Genomic Regions Area of Honors: Biochemistry and Molecular Biology Keywords: Neural NetworksENCODEDomain AdaptationTransposable ElementsRepetitive Regions File: Login to Download Thesis Supervisors: Shaun Mahony, Thesis SupervisorYing Gu, Thesis Honors Advisor