1. Addressing The Role Of The Not4 E3 Ubiquitin Ligase During DNA Damage-Induced Degradation Of RNAPII In Budding Yeast Open Access Author: Beebe, Laura M Title: Addressing The Role Of The Not4 E3 Ubiquitin Ligase During DNA Damage-Induced Degradation Of RNAPII In Budding Yeast Area of Honors: Biochemistry and Molecular Biology Keywords: DNA Damage RepairRNA PolymeraseYeastUbiquitinCcr4-NotGene Regulation File: Download Beebe_Laura_Honors_Thesis_sp2017.pdf Thesis Supervisors: Joseph C. Reese, Thesis SupervisorJoseph C. Reese, Thesis Honors AdvisorDavid Scott Gilmour, Faculty Reader
2. EXAMINING THE ROLE OF THE SANT DOMAIN IN BINDING OF LSD1-COREST TO THE H4 TAIL OF THE NUCLEOSOME Open Access Author: Spadafora, Victoria K Title: EXAMINING THE ROLE OF THE SANT DOMAIN IN BINDING OF LSD1-COREST TO THE H4 TAIL OF THE NUCLEOSOME Area of Honors: Biochemistry and Molecular Biology Keywords: LSD1/CoRESTNucleosomeHistoneGene Regulation File: Download Thesis_Final_3.pdf Thesis Supervisors: Song Tan, Thesis SupervisorMing Tien, Thesis Honors Advisor
3. An Enhancer-Based Deep Learning Approach for Studying Viral Regulation Open Access Author: Cooper, Rachel Title: An Enhancer-Based Deep Learning Approach for Studying Viral Regulation Area of Honors: Computer Science Keywords: Deep LearningBioinformaticsGene RegulationEnhancersVirusHSV-1 File: Download Cooper_Rachel_An_Enhancer-Based_Deep_Learning_Approach_For_Studying_Viral_Regulation.pdf Thesis Supervisors: Shaun Mahony, Thesis SupervisorJohn Joseph Hannan, Thesis Honors Advisor
4. Cross-Species Prediction of Transcription Factor Binding Restricted (Penn State Only) Author: Agarwala, Vandana Title: Cross-Species Prediction of Transcription Factor Binding Area of Honors: Computer Science Keywords: Gene RegulationDeep LearningTransfer LearningDomain AdaptationComputational BiologyBioinformaticsMachine Learning File: Login to Download Thesis Supervisors: Shaun Mahony, Thesis SupervisorJohn Joseph Hannan, Thesis Honors Advisor
