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Author:: Bialek, Lexie
Title:: Associations Between Child Environmental Enteric Dysfunction And Stress
Area of Honors:: Biochemistry and Molecular Biology
Keywords:: Environmental Enteric Dysfunction
Oxidative stress
Biomarker
Gut-Brain Axis
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Thesis Supervisors:: Timothy Charles Meredith, Thesis Supervisor
Teh-Hui Kao, Thesis Honors Advisor
Audrie Lin, Thesis Supervisor

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Author:: Chang, Benjamin
Title:: 1. Characterization of Twisters Ribozymes at Splice Sites 2. Development of a Computational Pipeline to Discover Small Self-cleaving Ribozymes with Helical Imperfections
Area of Honors:: Biochemistry and Molecular Biology
Keywords:: RNA
Ribozymes
Splicing
High-throughput Pipeline
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Thesis Supervisors:: Philip C Bevilacqua, Thesis Supervisor
Joseph C. Reese, Thesis Honors Advisor

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Author:: Cook, Rachel
Title:: Resilience of the Symbiosis Between Vibrio fischeri and Euprymna scolopes
Area of Honors:: Biochemistry and Molecular Biology
Keywords:: Symbiosis
Transgenerational effect
Diet
Reproduction
Euprymna scolopes
Vibrio fischeri
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Thesis Supervisors:: Wendy Hanna-Rose, Thesis Honors Advisor
Timothy Iwao Miyashiro, Thesis Supervisor

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Author:: Sokol, Joshua
Title:: Cost-effective Molecular Weight Standards for Protein Size Exclusion Chromatography
Area of Honors:: Biochemistry and Molecular Biology
Keywords:: Size exclusion chromatography
Gel filtration chromatography
Globular
Liquid chromatography
Protein
Recombinant DNA
SEC-MALS
Analytical Ultracentrifugation
Sedimentation equilibrium
Metal affinity chromatography
Ion-exchange chromatography
Molecular weight
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Thesis Supervisors:: Song Tan, Thesis Supervisor
Ying Gu, Thesis Honors Advisor

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Author:: Wang, Anqi
Title:: Understanding the Role of Envelope Protein of Tick-borne Flaviviruses in Vector Specificity
Area of Honors:: Biochemistry and Molecular Biology
Keywords:: Virology
biochemistry
flavivirus
chimera
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Thesis Supervisors:: Joyce Jose, Thesis Supervisor
Song Tan, Thesis Honors Advisor

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Author:: Harter, Rachel
Title:: Investigating Strain Level Diversity Among Natural Co-Isolated Vibrio Fischeri
Area of Honors:: Biochemistry and Molecular Biology
Keywords:: transformation
bacteria
strain diversity
genomic
genetic
vibrio fischeri
symbiosis
mutualism
euprymna scolopes
microbiology
molecular biology
biochemistry
quorum sensing
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Thesis Supervisors:: Timothy Iwao Miyashiro, Thesis Supervisor
Wendy Hanna-Rose, Thesis Honors Advisor

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Author:: Shi, Jeff
Title:: Neural Networks for Regulatory Element Analysis at Repetitive Genomic Regions
Area of Honors:: Biochemistry and Molecular Biology
Keywords:: Neural Networks
ENCODE
Domain Adaptation
Transposable Elements
Repetitive Regions
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Thesis Supervisors:: Shaun Mahony, Thesis Supervisor
Ying Gu, Thesis Honors Advisor

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Author:: Waldt, Hannah
Title:: Purification and Characterization of Chromatin Remodeler SNF2L
Area of Honors:: Biochemistry and Molecular Biology
Keywords:: Biochemistry
Structural Biology
Chromatin
ISWI
SNF2L
Negative Stain EM
Cryo-EM
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Thesis Supervisors:: Jean-Paul Armache, Thesis Supervisor
Santhosh Girirajan, Thesis Honors Advisor

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