1. On the Origin of Sequences: Computational Analysis of Somatic Hypermutation for Probabilistic Immunoglobulin Predecessor Identification Open Access Author: Lengerich, Benjamin J Title: On the Origin of Sequences: Computational Analysis of Somatic Hypermutation for Probabilistic Immunoglobulin Predecessor Identification Area of Honors: Computer Science Keywords: Computer ScienceMachine LearningBioinformaticsSomatic HypermutationImmunoglobulin Predecessor Identification File: Download Lengerich_Benjamin_thesis.pdf Thesis Supervisors: Raj Acharya, Thesis SupervisorDr. Jesse Louis Barlow, Thesis Honors Advisor
2. Random Forest Classification in Copy Number Variation Discovery Open Access Author: Jayakar, Gopal Title: Random Forest Classification in Copy Number Variation Discovery Area of Honors: Biochemistry and Molecular Biology Keywords: CNVMachine LearningSequencingGenomicsBioinformaticsRandom Forest File: Download Thesis_Jayakar.pdf Thesis Supervisors: Santhosh Girirajan, Thesis SupervisorSanthosh Girirajan, Thesis Honors AdvisorShaun Mahony, Faculty Reader
3. Cross-Species Prediction of Transcription Factor Binding Restricted (Penn State Only) Author: Agarwala, Vandana Title: Cross-Species Prediction of Transcription Factor Binding Area of Honors: Computer Science Keywords: Gene RegulationDeep LearningTransfer LearningDomain AdaptationComputational BiologyBioinformaticsMachine Learning File: Login to Download Thesis Supervisors: Shaun Mahony, Thesis SupervisorJohn Joseph Hannan, Thesis Honors Advisor
